Sangam: A Confluence of Knowledge Streams

An exome sequencing strategy to diagnose lethal autosomal recessive disorders

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dc.creator Ellard, Sian
dc.creator Kivuva, Emma
dc.creator Turnpenny, Peter D.
dc.creator Stals, Karen
dc.creator Johnson, Matthew
dc.creator Xie, W.
dc.creator Caswell, R.
dc.creator Lango Allen, H.
dc.date 2016-01-19T12:37:51Z
dc.date 2016-01-19T12:37:51Z
dc.date 2015-03-01
dc.date.accessioned 2023-02-17T19:47:50Z
dc.date.available 2023-02-17T19:47:50Z
dc.identifier Eur J Hum Genet. 2015 Mar;23(3):401-4.
dc.identifier 1476-5438
dc.identifier 24961629
dc.identifier 10.1038/ejhg.2014.120
dc.identifier http://hdl.handle.net/11287/593948
dc.identifier European journal of human genetics : EJHG
dc.identifier.uri http://localhost:8080/xmlui/handle/CUHPOERS/241988
dc.description Rare disorders resulting in prenatal or neonatal death are genetically heterogeneous. For some conditions, affected fetuses can be diagnosed by ultrasound scan, but this is not usually possible until mid-gestation. There is often limited fetal DNA available for investigation. We investigated a strategy for diagnosing autosomal recessive lethal disorders in non-consanguineous pedigrees with multiple affected fetuses. Exome sequencing was performed to identify genes where each parent is heterozygous for a rare non-synonymous-coding or splicing variant. Putative pathogenic variants were tested for cosegregation in affected fetuses and unaffected siblings. In eight couples of European ancestry, we found on average 1.75 genes (range 0-4) where both parents were heterozygous for rare potentially deleterious variants. A proof-of-principle study detected heterozygous DYNC2H1 variants in a couple whose five fetuses had short-rib polydactyly. Prospective analysis of two couples with multiple pregnancy terminations for fetal akinesia syndrome was performed and a diagnosis was obtained in both the families. The first couple were each heterozygous for a previously reported GLE1 variant, p.Arg569His or p.Val617Met; both were inherited by their two affected fetuses. The second couple were each heterozygous for a novel RYR1 variant, c.14130-2A>G or p.Ser3074Phe; both were inherited by their three affected fetuses but not by their unaffected child. Biallelic GLE1 and RYR1 disease-causing variants have been described in other cases with fetal akinesia syndrome. We conclude that exome sequencing of parental samples can be an effective tool for diagnosing lethal recessive disorders in outbred couples. This permits early prenatal diagnosis in future pregnancies.
dc.description This article is available via Open Access. Please click on the 'Additional Link' above to access the full-text.
dc.language eng
dc.publisher Nature
dc.relation http://dx.doi.org/10.1038/ejhg.2014.120
dc.title An exome sequencing strategy to diagnose lethal autosomal recessive disorders
dc.type Journal Article


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